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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GMDS, GDP-mannose 4,6-dehydratase
Sequence ID:NM_001253846
NM_001500
Entrez Gene ID:2762
Ensembl ID:ENSG00000112699

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 1624040 - 2176225


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3351070Full LengthBC000117GDP-mannose 4,6-dehydratase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001491  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001253846 NP_001240775      
NM_001500 NP_001491 O60547 EC 4.2.1.47 Epimerase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF042377 AAC13553 O60547 EC 4.2.1.47
AF040260 AAC24501 O60547 EC 4.2.1.47
BC000117 AAH00117 O60547 EC 4.2.1.47
DQ892789 ABM83715    
DQ896036 ABM87035    
AK313953 BAG36670 B2R9X3  
CR541929 CAG46727 O60547 EC 4.2.1.47
CR541947 CAG46745 O60547 EC 4.2.1.47

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GMDS NP_001491 M.musculus Gmds 218138 Gene Info NP_666153 97
R.norvegicus Gmds 291095   NP_001034695 97
A.gambiae AgaP_AGAP006783 1270281   XP_308963 71
D.melanogaster Gmd 33716   NP_608888 71
C.elegans gmd-2 186416   NP_493106 67
C.elegans bre-1 177717   NP_001076670 65
A.thaliana MUR1 824280   NP_190685 59
A.thaliana GMD1 836760   NP_201429 58
P.falciparum PF08_0077 2655276   XP_001349387 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)