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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBX4, T-box 4
Sequence ID:NM_018488
RefSeqGene ID:NG_008080
Entrez Gene ID:9496
Ensembl ID:ENSG00000121075

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 59533806 - 59561664

NM_018488 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12315953380659534036
2323265953489759534991
3274465954317959543298
4475945954487059545017
5957475955598759556139
7488365955724159557329
83710665955745059557679
106724695956026059561662

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020390Full LengthBC136403T-box 4
9052582Full LengthBC144062T-box 4
40147430Full LengthBC142620T-box 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060958  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018488 NP_060958 P57082 T-box

Related Sequences

 
mRNAGenPeptSwissProt
AF188703 AAF68854 P57082
BC136403 AAI36404 P57082
BC142620 AAI42621 A5PKU7
BC144062 AAI44063 B7ZLV3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBX4 NP_060958 M.musculus Tbx4 21387 Gene Info NP_035666 94
R.norvegicus Tbx4 303399   NP_001100504 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)