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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. S100A10, S100 calcium binding protein A10
Sequence ID:NM_002966
Entrez Gene ID:6281
Ensembl ID:ENSG00000197747

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 151955393 - 151966306

NM_002966 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16429151955386151955799
430582151958574151958726
5831069151966227151966713

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4103596Full LengthBC015973S100 calcium binding protein A10
6701084Full LengthBC105786S100 calcium binding protein A10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002957  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002966 NP_002957 P60903 S_100

Related Sequences

 
mRNAGenPeptSwissProt
M81457 AAA58404 P60903
M38591 AAA58426 P60903
BC015973 AAH15973 P60903
BC105786 AAI05787 P60903
DQ893555 ABM84481  
DQ893556 ABM84482  
DQ893557 ABM84483  
DQ896803 ABM87802  
DQ896804 ABM87803  
D28387 BAA05753  
AK291073 BAF83762 P60903
CR542162 CAG46959 Q6FGE5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens S100A10 NP_002957 M.musculus S100a10 20194 Gene Info NP_033138 92
R.norvegicus S100a10 81778   NP_112376 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)