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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLX4, SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
Sequence ID:NM_032444
RefSeqGene ID:NG_028123
Entrez Gene ID:84464
Ensembl ID:ENSG00000188827

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 3631185 - 3640135

 Exon Info From UCSC:
NM_032444

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4340346IncompleteBC036335BTB (POZ) domain containing 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115820  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032444 NP_115820 Q8IY92 BTB

Related Sequences

 
mRNAGenPeptSwissProt
AB058687 BAB47413 Q8IY92
AB075867 BAB85573 Q8IY92
AL442083 CAH10659 Q8IY92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLX4 NP_115820 M.musculus Slx4 52864 Gene Info NP_803423 62
R.norvegicus Slx4 302953   XP_220211 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)