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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC30A2, solute carrier family 30 (zinc transporter), member 2
Sequence ID:NM_001004434
NM_032513
Entrez Gene ID:7780
Ensembl ID:ENSG00000158014

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 26364512 - 26372476

 Exon Info From UCSC:
NM_001004434
NM_032513

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3948165Full LengthBC006251solute carrier family 30 (zinc transporter), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001004434  NP_115902  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001004434 NP_001004434   Cation_efflux
NM_032513 NP_115902 Q9BRI3 Cation_efflux

Related Sequences

 
mRNAGenPeptSwissProt
BC006251 AAH06251 Q9BRI3
AF370409 AAQ15245 Q9BRI3
JF432679 ADZ15896  
AK094027 BAG52799 B3KSN7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC30A2 NP_001004434 M.musculus Slc30a2 230810 Gene Info NP_001034766 81
R.norvegicus Slc30a2 25362   NP_001076591 80
D.melanogaster ZnT35C 34890   NP_609741 53
A.gambiae AgaP_AGAP009005 1279965   XP_319754 52
C.elegans T18D3.3 188574   NP_510091 50
A.thaliana MTPA2 825050   NP_191440 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)