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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C19orf57, chromosome 19 open reading frame 57
Sequence ID:NM_024323
Entrez Gene ID:79173
Ensembl ID:ENSG00000132016

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 13993167 - 14016909

NM_024323 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15981399316713993764
5996931399677313996867
69419681400000014001274
196920731400359814003702
207421551400395414004035
215623301400618414006358
233123821401567414015725
238324201401687114016908

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40117748Full LengthBC119719chromosome 19 open reading frame 57
3943685IncompleteBC002891chromosome 19 open reading frame 57
4708252IncompleteBC012945chromosome 19 open reading frame 57

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024323 NP_077299    

Related Sequences

 
mRNAGenPeptSwissProt
L17327 AAB02340 Q0VDD7
BC002891 AAH02891 Q0VDD7
BC012945 AAH12945 Q0VDD7
BC119719 AAI19720 Q0VDD7
AK097431 BAC05049 Q0VDD7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C19orf57 NP_077299 M.musculus 4930432K21Rik 74666 Gene Info NP_083321 45
R.norvegicus RGD1306072 304654   XP_222458 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)