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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPP30, ribonuclease P/MRP 30kDa subunit
Sequence ID:NM_001104546
NM_006413
Entrez Gene ID:10556
Ensembl ID:ENSG00000148688

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 92665106 - 92668312

 Exon Info From UCSC:
NM_001104546
NM_006413

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3827681Full LengthBC006991ribonuclease P/MRP 30kDa subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006404  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001104546 NP_001098016      
NM_006413 NP_006404 P78346 EC 3.1.26.5 RNase_P_p30

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U77665 AAC51143 P78346 EC 3.1.26.5
BC006991 AAH06991 P78346 EC 3.1.26.5
DQ893181 ABM84107    
DQ896488 ABM87487    
AK312900 BAG35746 P78346 EC 3.1.26.5
AK296196 BAG58925 B4DJR3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPP30 NP_001098016 R.norvegicus Rpp30 685332   XP_001063377 91
M.musculus Rpp30 54364 Gene Info NP_062301 90
A.gambiae AgaP_AGAP008481 1277497   XP_316963 35
S.pombe SPAC3A12.04c 2543062   NP_593330 34
D.melanogaster Rpp30 44392   NP_524749 33
N.crassa NCU08368 3881428   XP_965271 32
S.cerevisiae RPP1 856459   NP_011929 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)