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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARHGAP1, Rho GTPase activating protein 1
Sequence ID:NM_004308
Entrez Gene ID:392
Ensembl ID:ENSG00000175220

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 46707246 - 46719122

 Exon Info From UCSC:
NM_004308

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3896574Full LengthBC018118Rho GTPase activating protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004299  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004308 NP_004299 Q07960 RhoGAP

Related Sequences

 
mRNAGenPeptSwissProt
U02570 AAA16142 Q07960
U62794 AAB66594 O15376
BC018118 AAH18118 Q07960
DQ894145 ABM85071  
AK298562 BAG60756 B4DPZ4
Z23024 CAA80560 Q07960

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARHGAP1 NP_004299 M.musculus Arhgap1 228359 Gene Info NP_001139374 97
R.norvegicus Arhgap1 311193   NP_001101217 95
C.elegans rga-1 174751   NP_001022390 42
D.melanogaster RhoGAP68F 39385   NP_648552 36
S.pombe SPAC1565.02c 2541571   NP_593281 24

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta