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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB3IL1, RAB3A interacting protein (rabin3)-like 1
Sequence ID:NM_001271686
NM_013401
Entrez Gene ID:5866
Ensembl ID:ENSG00000167994

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 61664790 - 61675585

Transcript StartTranscript EndChromosomal Start Chromosomal End
2310816166477361665831
108211486166678561666851
114912486166991361670012
124913616167201761672129
136214906167222561672353
149117096167393761674155
171017876167486461674941
178818836167503661675131
188421366167552561675777
213723056168482861684996

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4390573Full LengthBC022239RAB3A interacting protein (rabin3)-like 1
5188805Full LengthBC051820RAB3A interacting protein (rabin3)-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037533  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271686 NP_001258615    
NM_013401 NP_037533 Q8TBN0 Sec2p

Related Sequences

 
mRNAGenPeptSwissProt
AF084557 AAF28399 Q8TBN0
BC022239 AAH22239 Q8TBN0
BC051820 AAH51820 Q8TBN0
DQ891184 ABM82110  
DQ894366 ABM85292  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB3IL1 NP_037533 R.norvegicus Rab3il1 171452   NP_599238 87
M.musculus Rab3il1 74760 Gene Info NP_653121 86
C.elegans F54C9.11 186226   NP_495817 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)