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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PITX3, paired-like homeodomain 3
Sequence ID:NM_005029
RefSeqGene ID:NG_008147
Entrez Gene ID:5309
Ensembl ID:ENSG00000107859

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ANTERIOR SEGMENT MESENCHYMAL DYSGENESISFOXE3
CATARACT, POSTERIOR POLAR, 4, SYNDROMIC 

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 103989942 - 103991840

NM_005029 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
20932103989945103990857
9331135103991344103991546
11361265103991719103991848
12661407104001089104001230

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4131442Full LengthBC011642paired-like homeodomain 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005020  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005029 NP_005020 O75364 Homeobox
OAR

Related Sequences

 
mRNAGenPeptSwissProt
AF041339 AAC24502 O75364
BC011642 AAH11642 O75364
DQ891945 ABM82871  
DQ895131 ABM86057  
DQ895132 ABM86058  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PITX3 NP_005020 M.musculus Pitx3 18742 Gene Info NP_032878 98
R.norvegicus Pitx3 29609   NP_062120 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)