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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NCOR2, nuclear receptor corepressor 2
Sequence ID:NM_001077261
NM_001206654
NM_006312
RefSeqGene ID:NG_022928
Entrez Gene ID:9612
Ensembl ID:ENSG00000196498

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 124831138 - 125052010

 Exon Info From UCSC:
NM_001077261
NM_006312

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3629785IncompleteBC004326nuclear receptor co-repressor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006303  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001077261 NP_001070729    
NM_001206654 NP_001193583    
NM_006312 NP_006303   Myb_DNA-binding

Related Sequences

 
mRNAGenPeptSwissProt
S83390 AAB50847 Q9Y618
U80750 AAB91446 Q9Y618
AF113003 AAD20946 Q9Y618
AF125672 AAD22973 Q9Y618
BC004326 AAH04326 Q9BT61
AY965853 AAX77219 Q9Y618
AB209089 BAD92326 Q9Y618

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NCOR2 NP_006303 M.musculus Ncor2 20602 Gene Info NP_035554 89
R.norvegicus Ncor2 360801   NP_001101804 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta