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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IRF8, interferon regulatory factor 8
Sequence ID:NM_002163
RefSeqGene ID:NG_029333
Entrez Gene ID:3394
Ensembl ID:ENSG00000140968

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 85932408 - 85954888

NM_002163 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1568593277385932828
572318593662085936794
2324158594259585942778
4165048594517585945263
5056108594673685946841
6116588594807885948125
65910458595202285952408
104611618595371485953829
116226598595471185956208

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991963Full LengthBC126247interferon regulatory factor 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002154  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002163 NP_002154 Q02556 IRF

Related Sequences

 
mRNAGenPeptSwissProt
M91196 AAB63813 Q02556
BC126247 AAI26248 Q02556
AK313524 BAG36304 B2R8V7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IRF8 NP_002154 M.musculus Irf8 15900 Gene Info NP_032346 90
R.norvegicus Irf8 292060   NP_001008722 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)