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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VIT, vitrin
Sequence ID:NM_001177969
NM_001177970
NM_001177971
NM_001177972
NM_053276
Entrez Gene ID:5212
Ensembl ID:ENSG00000205221

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 36924008 - 37041932

 Exon Info From UCSC:
NM_001177969
NM_001177970
NM_001177971
NM_001177972
NM_053276

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40117956Full LengthBC128260vitrin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444506  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177969 NP_001171440 Q6UXI7  
NM_001177970 NP_001171441    
NM_001177971 NP_001171442    
NM_001177972 NP_001171443    
NM_053276 NP_444506   VWA
LCCL

Related Sequences

 
mRNAGenPeptSwissProt
BC061519 AAH61519 Q6UXI7
BC128260 AAI28261 A1A526
AF063833 AAL18263 Q6UXI7
AY358338 AAQ88704 Q6UXI7
AK056772 BAB71279 Q6UXI7
AK292149 BAF84838 Q6UXI7
AK299426 BAG61406 B4DRU4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VIT NP_001171440 M.musculus Vit 74199 Gene Info NP_083089 84
R.norvegicus Vit 313831   XP_233802 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)