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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H1D, histone cluster 1, H1d
Sequence ID:NM_005320
Entrez Gene ID:3007
Ensembl ID:ENSG00000124575

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 26234495 - 26235215

NM_005320 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
27772623444026235215

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143877Full LengthBC104874histone cluster 1, H1d
8327439Full LengthBC111971histone cluster 1, H1d

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005311  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005320 NP_005311 P16402 Linker_histone

Related Sequences

 
mRNAGenPeptSwissProt
BC104874 AAI04875 P16402
BC111971 AAI11972 P16402
EU446961 ABZ92490  
AK312845 BAG35698 P16402

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H1D NP_005311 M.musculus Hist1h1d 14957 Gene Info NP_663759 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)