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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. USP10, ubiquitin specific peptidase 10
Sequence ID:NM_005153
Entrez Gene ID:9100
Ensembl ID:ENSG00000103194

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 84733609 - 84812621

 Exon Info From UCSC:
NM_005153

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3501606Full LengthBC000263ubiquitin specific peptidase 10
3633474IncompleteBC064516ubiquitin specific peptidase 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005144  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005153 NP_005144 Q14694 EC 3.4.19.12 UCH
PAM2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC000263 AAH00263 Q14694 EC 3.4.19.12
BC064516 AAH64516 Q6P2I0  
DQ892553 ABM83479    
DQ895764 ABM86690    
D80012 BAA11507 Q14694 EC 3.4.19.12
AK315570 BAG37945 Q14694 EC 3.4.19.12
AK293304 BAG56825 B4DDR4  
AK299618 BAG61546 Q14694 EC 3.4.19.12
AL162049 CAB82392 Q14694 EC 3.4.19.12
BX537402 CAD97644 Q14694 EC 3.4.19.12
CR749515 CAH18330 Q68D90  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens USP10 NP_005144 R.norvegicus Usp10 307905   NP_001029318 85
M.musculus Usp10 22224 Gene Info NP_033488 84
A.thaliana UBP24 829213   NP_001190875 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)