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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ALOX12B, Arachidonate 12-lipoxygenase, 12R type
Sequence ID:NM_001139
RefSeqGene ID:NG_007099
Entrez Gene ID:242
Ensembl ID:ENSG00000179477

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ICHTHYOSIFORM ERYTHRODERMA, CONGENITAL, NONBULLOUS, 1ALOXE3
TGM1

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 7975984 - 7991021

 Exon Info From UCSC:
NM_001139

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5441563Full LengthBC041058arachidonate 12-lipoxygenase, 12R type

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001130  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001139 NP_001130 O75342 Lipoxygenase
PLAT

Related Sequences

 
mRNAGenPeptSwissProt
AF038461 AAC39770 O75342
AF059250 AAC79680 O75342
BC041058 AAH41058 O75342

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ALOX12B NP_001130 R.norvegicus Alox12b 287425   NP_001034466 87
M.musculus Alox12b 11686 Gene Info NP_033789 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)