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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ROBO1, roundabout, axon guidance receptor, homolog 1 (Drosophila)
Sequence ID:NM_001145845
NM_002941
NM_133631
RefSeqGene ID:NG_011729
Entrez Gene ID:6091
Ensembl ID:ENSG00000169855

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 78648063 - 79639061

 Exon Info From UCSC:
NM_001145845
NM_002941
NM_133631

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7961997Full LengthBC115020roundabout, axon guidance receptor, homolog 1 (Drosophila)
7962000Full LengthBC115022roundabout, axon guidance receptor, homolog 1 (Drosophila)
9054509Full LengthBC171855roundabout, axon guidance receptor, homolog 1 (Drosophila)
9057080Full LengthBC157861roundabout, axon guidance receptor, homolog 1 (Drosophila)
40037251Full LengthBC112336roundabout, axon guidance receptor, homolog 1 (Drosophila)
3454108IncompleteBC001969roundabout, axon guidance receptor, homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002932  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145845 NP_001139317    
NM_002941 NP_002932 Q9Y6N7 fn3
I-set
NM_133631 NP_598334    

Related Sequences

 
mRNAGenPeptSwissProt
AF040990 AAC39575 Q9Y6N7
BC001969 AAH01969 Q9Y6N7
BC112336 AAI12337 Q2M1J3
BC115020 AAI15021 Q1RMC8
BC115022 AAI15023 Q1RMC7
BC157861 AAI57862 Q9Y6N7
BC171855 AAI71855 Q9Y6N7
AK297481 BAG59902 B4DMJ0
AK299920 BAH13173 B7Z687
BX538319 CAD98093 Q9Y6N7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ROBO1 NP_002932 M.musculus Robo1 19876 Gene Info NP_062286 96
R.norvegicus Robo1 58946   NP_071524 94
D.melanogaster lea 44522   NP_536792 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)