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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SH3GLB1, SH3-domain GRB2-like endophilin B1
Sequence ID:NM_001206651
NM_001206652
NM_001206653
NM_016009
RefSeqGene ID:NG_030018
Entrez Gene ID:51100
Ensembl ID:ENSG00000097033

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 87170303 - 87213863

Transcript StartTranscript EndChromosomal Start Chromosomal End
13988717025687170653
3995408718140687181547
5416698718518987185317
6708038718822287188355
8048968718999587190087
8979868720028487200373
98710878720076187200861
108813168720789087208118
131763728720881087213865

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2988769Full LengthBC007455SH3-domain GRB2-like endophilin B1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057093  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001206651 NP_001193580    
NM_001206652 NP_001193581    
NM_001206653 NP_001193582    
NM_016009 NP_057093 Q9Y371 SH3_1
BAR

Related Sequences

 
mRNAGenPeptSwissProt
AF151819 AAD34056 Q9Y371
AF263293 AAF73017 Q9Y371
AF257318 AAF81225 Q9Y371
BC007455 AAH07455 Q9Y371
AF350371 AAK27365 Q9Y371
DQ893029 ABM83955  
DQ896273 ABM87272  
AK001954 BAA91999 Q9Y371
AB007960 BAD88797 Q9Y371
AK303710 BAG64694 B4E182

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SH3GLB1 NP_001193580 M.musculus Sh3glb1 54673 Gene Info NP_062337 96
R.norvegicus Sh3glb1 292156   NP_001011929 95
A.gambiae AgaP_AGAP010376 1272668   XP_311569 46
D.melanogaster endoB 37218   NP_611410 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta