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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SALL1, Sal-like 1 (Drosophila)
Sequence ID:NM_001127892
NM_002968
RefSeqGene ID:NG_007990
Entrez Gene ID:6299
Ensembl ID:ENSG00000103449

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 51170584 - 51185181

 Exon Info From UCSC:
NM_001127892
NM_002968

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068162Full LengthBC167772sal-like 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002959  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001127892 NP_001121364    
NM_002968 NP_002959 Q9NSC2 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC113881 AAI13882 Q14CE9
BC113906 AAI13907 Q14CE9
BC131548 AAI31549 Q14CE9
BC167772 AAI67772 Q9NSC2
AK295103 BAG58138 B4DHH6
Y18265 CAB41400 Q9NSC2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SALL1 NP_002959 M.musculus Sall1 58198 Gene Info NP_067365 91
R.norvegicus Sall1 307740   NP_001100885 90
D.melanogaster salr 34568   NP_723669 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)