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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CMA1, chymase 1, mast cell
Sequence ID:NM_001836
Entrez Gene ID:1215
Ensembl ID:ENSG00000092009

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 24974724 - 24977441

NM_001836 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11542497471124974864
1554092497523324975487
4105452497567424975809
5466962497656124976711
6977842497738324977470

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7216927Full LengthBC069110chymase 1, mast cell
7262100Full LengthBC069370chymase 1, mast cell
7262112Full LengthBC069490chymase 1, mast cell
40015325Full LengthBC103974chymase 1, mast cell
40015326Full LengthBC103975chymase 1, mast cell

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001827  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001836 NP_001827 P23946 EC 3.4.21.39 Trypsin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M69136 AAA52019 P23946 EC 3.4.21.39
S61334 AAB26828 P23946 EC 3.4.21.39
BC069110 AAH69110 P23946 EC 3.4.21.39
BC069370 AAH69370 P23946 EC 3.4.21.39
BC069490 AAH69490 P23946 EC 3.4.21.39
BC103974 AAI03975 Q3SY37  
BC103975 AAI03976 P23946 EC 3.4.21.39
DQ082727 AAZ06432 Q4FEB5  
DQ082729 AAZ06434 Q4FEB3  
AB451464 BAG70278 P23946 EC 3.4.21.39

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CMA1 NP_001827 M.musculus Cma1 17228 Gene Info NP_034910 74
R.norvegicus Cma1 25627   NP_037224 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta