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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ANKRD54, ankyrin repeat domain 54
Sequence ID:NM_138797
NR_036556
Entrez Gene ID:129138
Ensembl ID:ENSG00000100124

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 38226862 - 38230735

NM_138797 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
5212133822686238228023
121413213822864338228750
132214463822896438229088
144714943822916538229212
149515663822969038229761
156716653823450638234604
166617133823619338236240
171420993823991738240302

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2988073Full LengthBC014641ankyrin repeat domain 54
4795922Full LengthBC066909ankyrin repeat domain 54

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620152  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138797 NP_620152 Q6NXT1 Ank

Related Sequences

 
mRNAGenPeptSwissProt
BC014641 AAH14641 Q6NXT1
BC066909 AAH66909 Q6NXT1
AK127583 BAC87043 Q6NXT1
CR456471 CAG30357 Q6NXT1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ANKRD54 NP_620152 R.norvegicus Ankrd54 362957   NP_001020456 93
M.musculus Ankrd54 223690 Gene Info NP_659098 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)