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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MR1, Major histocompatibility complex, class I-related
Sequence ID:NM_001531
NM_001194999
NM_001195000
NM_001195035
Entrez Gene ID:3140
Ensembl ID:ENSG00000153029

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 181003138 - 181024422

Transcript StartTranscript EndChromosomal Start Chromosomal End
172181003138181003209
73333181018187181018447
334609181019146181019421
610885181021370181021645
886990181022708181022812
9911263181024360181024632

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4540305Full LengthBC012485major histocompatibility complex, class I-related

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001522  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001194999 NP_001181928    
NM_001195000 NP_001181929    
NM_001195035 NP_001181964    
NM_001531 NP_001522 Q95460 MHC_I
C1-set

Related Sequences

 
mRNAGenPeptSwissProt
U22963 AAC50174 Q95460
AF010446 AAD01442 Q95460
AF010447 AAD01443 Q95460
AF031469 AAD01933 Q95460
BC012485 AAH12485 Q95460
AK222910 BAD96630 Q95460
AK290374 BAF83063 Q95460
AK304645 BAG65423 Q95460
AJ249778 CAB77667 Q95460

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MR1 NP_001522 M.musculus Mr1 15064 Gene Info NP_032235 78
R.norvegicus Mr1 25119   NP_001094105 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)