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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RDH16, retinol dehydrogenase 16 (all-trans)
Sequence ID:NM_003708
Entrez Gene ID:8608
Ensembl ID:ENSG00000139547

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 57345221 - 57353158

NM_003708 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
188305734521757346029
8319945734661057346773
99512535734868957348947
125417385735093357351417

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100064017Full LengthBC160081retinol dehydrogenase 16 (all-trans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003699  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003708 NP_003699 O75452 adh_short

Related Sequences

 
mRNAGenPeptSwissProt
AF057034 AAC39922 O75452
AF086735 AAC72923 O75452
BC160081 AAI60081  
DQ499468 ABF51671 Q1HDS8
AB209332 BAD92569 Q59FX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RDH16 NP_003699 M.musculus Rdh7 54150 Gene Info NP_059501 73
R.norvegicus Rdh7 360420   NP_598227 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)