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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CSF2, colony stimulating factor 2 (granulocyte-macrophage)
Sequence ID:NM_000758
Entrez Gene ID:1437
Ensembl ID:ENSG00000164400

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 131409567 - 131411545

NM_000758 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1191131409484131409674
192233131409773131409814
234359131410502131410627
360780131411437131411857

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3886571Full LengthBC108724colony stimulating factor 2 (granulocyte-macrophage)
40084798Full LengthBC113999colony stimulating factor 2 (granulocyte-macrophage)
40084800Full LengthBC113924colony stimulating factor 2 (granulocyte-macrophage)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000749  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000758 NP_000749 P04141 GM_CSF

Related Sequences

 
mRNAGenPeptSwissProt
M10663 AAA52121 P04141
M11734 AAA52122 P04141
M11220 AAA52578 P04141
BC108724 AAI08725 P04141
BC113924 AAI13925 P04141
BC113999 AAI14000 P04141
AF510855 AAM44054 P04141
AY720441 AAU21240 Q647J8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CSF2 NP_000749 R.norvegicus Csf2 116630   XP_340800 63
M.musculus Csf2 12981 Gene Info NP_034099 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta