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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ABCA12, ATP-binding cassette, sub-family A (ABC1), member 12
Sequence ID:NM_015657
NM_173076
RefSeqGene ID:NG_007074
Entrez Gene ID:26154
Ensembl ID:ENSG00000144452

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ICHTHYOSIS, HARLEQUIN 
ICHTHYOSIS, LAMELLAR 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 215797300 - 215914384

 Exon Info From UCSC:
NM_015657
NM_173076

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100061792BC156327ATP-binding cassette, sub-family A (ABC1), member 12

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015657 NP_056472    
NM_173076 NP_775099 Q86UK0  

Related Sequences

 
mRNAGenPeptSwissProt
BC156327 AAI56328 Q86UK0
AY033486 AAK54355 Q86UK0
AF418105 AAN40735 Q86UK0
AY219711 AAP21093 Q86UK0
AK123578 BAG53915 B3KVV3
AL080207 CAB45776 Q86UK0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABCA12 NP_775099 M.musculus Abca12 74591 Gene Info NP_780419 90
R.norvegicus Abca12 301482   XP_237242 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)