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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NKX6-2, NK6 homeobox 2
Sequence ID:NM_177400
Entrez Gene ID:84504
Ensembl ID:ENSG00000148826

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 134598341 - 134599537

NM_177400 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1355134598319134598673
356528134598783134598955
5291019134599046134599536

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069141Full LengthBC101635NK6 homeobox 2
8143826Full LengthBC104823NK6 homeobox 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_796374  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177400 NP_796374 Q9C056 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC101635 AAI01636 Q9C056
BC104823 AAI04824 Q9C056

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NKX6-2 NP_796374 M.musculus Nkx6-2 14912 Gene Info NP_899071 97
R.norvegicus Nkx6-2 309095   NP_001101028 97
D.melanogaster HGTX 53446   NP_001137954 59
A.gambiae AgaP_AGAP002431 3290618   XP_563754 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)