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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLPS, colipase, pancreatic
Sequence ID:NM_001252597
NM_001252598
NM_001832
Entrez Gene ID:1208
Ensembl ID:ENSG00000137392

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 35762885 - 35765057

Transcript StartTranscript EndChromosomal Start Chromosomal End
12953576275935763053
2964183576350735763629
4195393576498135765101

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3950152Full LengthBC007061colipase, pancreatic
4251084Full LengthBC017897colipase, pancreatic

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001823  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252597 NP_001239526    
NM_001252598 NP_001239527    
NM_001832 NP_001823 P04118 Colipase
Colipase_C

Related Sequences

 
mRNAGenPeptSwissProt
J02883 AAA52054 P04118
BC007061 AAH07061 P04118
BC017897 AAH17897 P04118
BT006812 AAP35458 P04118
AY780648 AAV35728 P04118
AY780649 AAV35729 Q5U808
JF432763 ADZ15980  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLPS NP_001823 M.musculus Clps 109791 Gene Info NP_079745 76
R.norvegicus Clps 25680   NP_037271 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)