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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ZC3HAV1, Zinc finger CCCH-type, antiviral 1
Sequence ID:NM_020119
NM_024625
RefSeqGene ID:NG_029457
Entrez Gene ID:56829
Ensembl ID:ENSG00000105939

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 138745083 - 138764013

 Exon Info From UCSC:
NM_020119
NM_024625

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5418915Full LengthBC025308zinc finger CCCH-type, antiviral 1
5418956Full LengthBC033105zinc finger CCCH-type, antiviral 1
5531412Full LengthBC040956zinc finger CCCH-type, antiviral 1
3954675IncompleteBC002935zinc finger CCCH-type, antiviral 1
4154337IncompleteBC027462zinc finger CCCH-type, antiviral 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020119 NP_064504 Q7Z2W4  
NM_024625 NP_078901    

Related Sequences

 
mRNAGenPeptSwissProt
AF138863 AAF61195 Q7Z2W4
BC002935 AAH02935 Q05DV5
BC025308 AAH25308 Q7Z2W4
BC027462 AAH27462 Q7Z2W4
BC033105 AAH33105 Q7Z2W4
BC040956 AAH40956 Q7Z2W4
AK023350 BAB14537 Q7Z2W4
AK055851 BAB71028 Q7Z2W4
AK292811 BAF85500 A8K9U6
BX571742 CAE11868 Q7Z2W4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZC3HAV1 NP_064504 M.musculus Zc3hav1 78781 Gene Info NP_082697 62
R.norvegicus Zc3hav1 252832   NP_766633 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)