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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMLHE, trimethyllysine hydroxylase, epsilon
Sequence ID:NM_001184797
NM_018196
RefSeqGene ID:NG_021318
Entrez Gene ID:55217
Ensembl ID:ENSG00000185973

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 154721097 - 154842493

 Exon Info From UCSC:
NM_001184797
NM_018196

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3689631Full LengthBC025269trimethyllysine hydroxylase, epsilon

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060666  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001184797 NP_001171726      
NM_018196 NP_060666 Q9NVH6 EC 1.14.11.8 TauD

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC025269 AAH25269 Q9NVH6 EC 1.14.11.8
AF373407 AAL01871 Q9NVH6 EC 1.14.11.8
AK001589 BAA91775 Q9NVH6 EC 1.14.11.8
AK291694 BAF84383 Q9NVH6 EC 1.14.11.8
AK304830 BAG65575 Q9NVH6 EC 1.14.11.8
CR457265 CAG33546 Q9NVH6 EC 1.14.11.8
AM393196 CAL38074 Q9NVH6 EC 1.14.11.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMLHE NP_060666 M.musculus Tmlhe 192289 Gene Info NP_620097 88
R.norvegicus Tmlhe 170898   NP_596878 86
A.gambiae AgaP_AGAP005447 1276140   XP_315450 39
C.elegans gbh-2 174358   NP_495793 37
D.melanogaster CG4335 42421   NP_650886 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)