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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RAP1GDS1, RAP1, GTP-GDP dissociation stimulator 1
Sequence ID:NM_001100426
NM_001100427
NM_001100428
NM_001100429
NM_001100430
NM_021159
Entrez Gene ID:5910
Ensembl ID:ENSG00000138698

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q23-q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 99214557 - 99363268

 Exon Info From UCSC:
NM_001100426
NM_001100427
NM_001100428
NM_001100429
NM_001100430
NM_021159

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3010166Full LengthBC001816RAP1, GTP-GDP dissociation stimulator 1
3010166Full LengthBC001851RAP1, GTP-GDP dissociation stimulator 1
40001057Full LengthBC098334RAP1, GTP-GDP dissociation stimulator 1
40001058Full LengthBC099708RAP1, GTP-GDP dissociation stimulator 1
40001059Full LengthBC098269RAP1, GTP-GDP dissociation stimulator 1
40001061Full LengthBC099845RAP1, GTP-GDP dissociation stimulator 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066982  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001100426 NP_001093896    
NM_001100427 NP_001093897 P52306  
NM_001100428 NP_001093898    
NM_001100429 NP_001093899    
NM_001100430 NP_001093900    
NM_021159 NP_066982 Q9BUX6 Arm

Related Sequences

 
mRNAGenPeptSwissProt
AF215923 AAF32290 P52306
AF237413 AAF43211 P52306
BC001816 AAH01816 Q9BUX6
BC001851 AAH01851 Q9BUX6
BC098269 AAH98269 Q4QQI8
BC098334 AAH98334 P52306
BC099708 AAH99708 P52306
BC099845 AAH99845 P52306
BT006837 AAP35483 Q9BUX6
AY376900 AAQ85126 Q6U7G8
DQ890761 ABM81687  
AK055032 BAG51452 B3KNU0
AK295156 BAH11994 B7Z2V8
AK297543 BAH12611 B7Z4M5
X63465 CAA45067 P52306

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAP1GDS1 NP_001093896 R.norvegicus Rap1gds1 310909   NP_001101198 97
M.musculus Rap1gds1 229877 Gene Info NP_001035780 95
A.gambiae AgaP_AGAP005262 1274980   XP_314182 34
D.melanogaster vimar 35609   NP_477305 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)