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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HSD17B12, hydroxysteroid (17-beta) dehydrogenase 12
Sequence ID:NM_016142
Entrez Gene ID:51144
Ensembl ID:ENSG00000149084

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 43702304 - 43878169

 Exon Info From UCSC:
NM_016142

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3622879Full LengthBC012043hydroxysteroid (17-beta) dehydrogenase 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057226  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016142 NP_057226 Q53GQ0 EC 1.1.1.62 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF078850 AAD44482 Q53GQ0 EC 1.1.1.62
BC012043 AAH12043 Q53GQ0 EC 1.1.1.62
BC012536 AAH12536 Q96EA9  
EU176708 ABW03509    
AK222881 BAD96601 Q53GQ0 EC 1.1.1.62
AK292625 BAF85314 Q53GQ0 EC 1.1.1.62
AK074952 BAG52039 Q53GQ0 EC 1.1.1.62
AK075011 BAG52052 B3KQJ0  
AK075216 BAG52086 Q53GQ0 EC 1.1.1.62
AK301663 BAG63138 B4DWS6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HSD17B12 NP_057226 R.norvegicus Hsd17b12 84013   NP_114455 83
M.musculus Hsd17b12 56348 Gene Info NP_062631 81
D.melanogaster CG1444 31703   NP_572420 55
A.gambiae AgaP_AGAP004532 1274678   XP_313833 48
A.thaliana KCR1 843098   NP_564905 43
C.elegans let-767 175895   NP_498386 43
S.pombe SPAC4G9.15 2543099   NP_593697 41
C.elegans stdh-4 184934   NP_505205 37
C.elegans stdh-1 182291   NP_506449 37
N.crassa NCU11297 3873215   XP_957031 37
C.elegans stdh-2 184337   NP_507092 36
C.elegans stdh-3 182292   NP_506448 36
S.cerevisiae IFA38 852456   NP_009717 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)