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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CSTF2, cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
Sequence ID:NM_001325
RefSeqGene ID:NG_015848
Entrez Gene ID:1478
Ensembl ID:ENSG00000101811

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 100075391 - 100095921

 Exon Info From UCSC:
NM_001325

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4447470Full LengthBC017712cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
3633477IncompleteBC033135cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001316  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001325 NP_001316 P33240 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
M85085 AAA35724 P33240
BC017712 AAH17712 P33240
BC033135 AAH33135 P33240
BT009778 AAP88780 P33240
DQ891532 ABM82458  
DQ894721 ABM85647  
EU616679 ACF05699 B3V096
AK300600 BAG62297 B4DUD5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CSTF2 NP_001316 M.musculus Cstf2 108062 Gene Info NP_573459 94
A.gambiae AgaP_AGAP004414 1274558   XP_313699 57
A.thaliana CSTF64 843510   NP_177325 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta