Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. WDR45L, WDR45-like
Sequence ID:NM_019613
Entrez Gene ID:56270
Ensembl ID:ENSG00000141580

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 80572446 - 80588869

NM_019613 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1214738057243980573900
147415958057439980574520
159616978057517180575272
169817838057691880577003
178419748057948480579674
197520698058326480583358
207021578058507980585166
215822598058879680588897
226023348060182480601898
233525968060614980606410

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3450672IncompleteBC000974WDR45-like
4120385IncompleteBC007838WDR45-like

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019613 NP_062559 Q5MNZ6  

Related Sequences

 
mRNAGenPeptSwissProt
AF091083 AAC72952 Q5MNZ6
AY691427 AAV80763 Q5MNZ6
EU446824 ABZ92353  
AK297477 BAG59898 B4DMI6
CR456770 CAG33051 Q5MNZ6
AM182326 CAJ57996 Q5MNZ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WDR45L NP_062559 M.musculus Wdr45l 66840 Gene Info NP_080069 99
R.norvegicus Wdr45l 360682   NP_001034676 99
A.gambiae AgaP_AGAP012792 1268433   XP_560966 68
D.melanogaster CG11975 41074   NP_649853 68
A.thaliana ATG18C 818678   NP_181613 48
A.thaliana ATG18D 824811   NP_191203 47
S.cerevisiae HSV2 853138   NP_011739 43
P.falciparum PF10_0126 810284   XP_001347411 36
S.pombe SPAC458.06 2543338   NP_594700 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)