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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. B3GALTL, beta 1,3-galactosyltransferase-like
Sequence ID:NM_194318
RefSeqGene ID:NG_011732
Entrez Gene ID:145173
Ensembl ID:ENSG00000187676

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 31774221 - 31903805

 Exon Info From UCSC:
NM_194318

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4837250Full LengthBC068595beta 1,3-galactosyltransferase-like
4825471IncompleteBC032021beta 1,3-galactosyltransferase-like
5267752IncompleteBC047395beta 1,3-galactosyltransferase-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_919299  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_194318 NP_919299 Q6Y288 Fringe

Related Sequences

 
mRNAGenPeptSwissProt
BC068595 AAH68595 Q6Y288
AY190526 AAO37647 Q6Y288
AB101481 BAD13528 Q6Y288
AK291273 BAF83962 Q6Y288

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens B3GALTL NP_919299 M.musculus B3galtl 381694 Gene Info NP_001074673 85
A.gambiae AgaP_AGAP009562 1271355   XP_310125 46
D.melanogaster CG9109 33844   NP_608982 41
C.elegans ZC250.2 178968   NP_504520 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)