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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H1B, histone cluster 1, H1b
Sequence ID:NM_005322
Entrez Gene ID:3009
Ensembl ID:ENSG00000184357

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 27834569 - 27835359

NM_005322 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
27902783457027835358

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7216915Full LengthBC069101histone cluster 1, H1b
8069087Full LengthBC101581histone cluster 1, H1b
8069089Full LengthBC101583histone cluster 1, H1b

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005313  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005322 NP_005313 P16401 Linker_histone

Related Sequences

 
mRNAGenPeptSwissProt
BC069101 AAH69101 P16401
BC101581 AAI01582 P16401
BC101583 AAI01584 P16401
EU446959 ABZ92488  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H1B NP_005313 M.musculus Hist1h1b 56702 Gene Info NP_064418 92
R.norvegicus Hist1h1b 680522   NP_001102887 90
A.gambiae AgaP_AGAP010461 1272577   XP_311486 58
A.gambiae AgaP_AGAP011193 1270732   XP_309451 57
A.gambiae AgaP_AGAP005264 1274982   XP_314184 55
A.gambiae AgaP_AGAP005266 1274984   XP_314186 55
A.gambiae AgaP_AGAP005265 1274983   XP_314185 50
D.melanogaster His1:CG33810 3771879   NP_001027295 45
D.melanogaster His1:CG33813 3771838   NP_001027299 45
D.melanogaster His1:CG33804 3771818   NP_001027286 45
D.melanogaster His1:CG33864 3772409   NP_001027384 45
D.melanogaster His1:CG33861 3771736   NP_001027379 45
D.melanogaster His1:CG33855 3771991   NP_001027369 45
D.melanogaster His1:CG33840 3772225   NP_001027344 45
D.melanogaster His1:CG33849 3771912   NP_001027359 45
D.melanogaster His1:CG33831 3772075   NP_001027329 45
D.melanogaster His1:CG33828 3771910   NP_001027324 45
D.melanogaster His1:CG33822 3772665   NP_001027314 45
D.melanogaster His1:CG33801 3772056   NP_001027282 45
D.melanogaster His1:CG33858 3772581   NP_001027374 45
D.melanogaster His1:CG33819 3771981   NP_001027309 45
D.melanogaster His1:CG33846 3772702   NP_001027354 45
D.melanogaster His1:CG33843 3772004   NP_001027349 45
D.melanogaster His1:CG33816 3771816   NP_001027304 45
D.melanogaster His1:CG33837 3772077   NP_001027339 45
D.melanogaster His1:CG33807 3771734   NP_001027290 45
D.melanogaster His1:CG31617 318854   NP_724341 45
D.melanogaster His1:CG33825 3772715   NP_001027319 45
D.melanogaster His1:CG33834 3771911   NP_001027334 45
D.melanogaster His1:CG33852 3771803   NP_001027364 45
N.crassa NCU06863 3874176   XP_958029 44
A.thaliana AT1G06760 837187   NP_172161 41
S.cerevisiae HHO1 855976   NP_015198 40
A.thaliana AT2G30620 817612   NP_180620 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)