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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TPCN2, two pore segment channel 2
Sequence ID:NM_139075
RefSeqGene ID:NG_016153
Entrez Gene ID:219931
Ensembl ID:ENSG00000162341

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
[SKIN/HAIR/EYE PIGMENTATION 10, BLOND/BROWN HAIR] 

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 68816364 - 68855898

 Exon Info From UCSC:
NM_139075

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5214862Full LengthBC063008two pore segment channel 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620714  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139075 NP_620714 Q8NHX9 Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC063008 AAH63008 Q8NHX9
AY029200 AAK31802 Q8NHX9
AB209253 BAD92490 Q59G56
AK023366 BAG51185 B3KN23
AK298919 BAG61025 B4DQR3
AL137479 CAB70760 Q8NHX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TPCN2 NP_620714 R.norvegicus Tpcn2 309139   NP_001101036 76
M.musculus Tpcn2 233979 Gene Info NP_666318 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)