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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SUSD2, sushi domain containing 2
Sequence ID:NM_019601
Entrez Gene ID:56241
Ensembl ID:ENSG00000099994

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 24577424 - 24585069

 Exon Info From UCSC:
NM_019601

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5457186Full LengthBC033107sushi domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062547  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019601 NP_062547 Q9UGT4 Sushi
VWD
Somatomedin_B
AMOP

Related Sequences

 
mRNAGenPeptSwissProt
BC033107 AAH33107 Q9UGT4
AK026431 BAB15481 Q9UGT4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SUSD2 NP_062547 M.musculus Susd2 71733 Gene Info NP_082166 77
R.norvegicus Susd2 294335   NP_001099851 76
C.elegans K03H1.5 176404   NP_499205 33
D.melanogaster CG31004 43688   NP_001163782 33
A.gambiae AgaP_AGAP000550 1271674   XP_310533 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)