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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ABCA9, ATP-binding cassette, sub-family A (ABC1), member 9
Sequence ID:NM_080283
NM_172386
Entrez Gene ID:10350
Ensembl ID:ENSG00000154258

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 66972055 - 67047267


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068171Full LengthBC167781ATP-binding cassette, sub-family A (ABC1), member 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_525022  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080283 NP_525022 Q8IUA7 ABC_tran

Related Sequences

 
mRNAGenPeptSwissProt
BC062472 AAH62472 Q8IUA7
BC167781 AAI67781  
AY028899 AAK30024 Q8IUA7
AF423307 AAN32751 Q8IUA7
AK057068 BAB71359 Q8IUA7
AK074491 BAC11021 Q8IUA7
CR627382 CAH10479 Q6AI35

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABCA9 NP_525022 M.musculus Abca9 217262 Gene Info NP_671753 79
R.norvegicus Abca9 287788   XP_221101 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)