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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DHRSX, dehydrogenase/reductase (SDR family) X-linked
Sequence ID:NM_145177
Entrez Gene ID:207063
Ensembl ID:ENSG00000169084

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.33; Yp11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 2404476 - 2419008

NM_145177 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
30174321375562139269
1744195121610632161270
1952215921847802184987
2160226122095422209643
2262233023267852326853
2331243823432372343344
2439259624188572419014

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5192975Full LengthBC032340dehydrogenase/reductase (SDR family) X-linked
4398682IncompleteBC019696dehydrogenase/reductase (SDR family) X-linked

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004720  NP_660160  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001171135 NP_001164606    
NM_001171136 NP_001164607    
NM_004729 NP_004720 O96006 zf-BED
hATC
NM_145177 NP_660160 Q8N5I4 adh_short

Related Sequences

 
mRNAGenPeptSwissProt
BC015030 AAH15030 O96006
BC019696 AAH19696 Q8N5I4
BC032340 AAH32340 Q8N5I4
AY358849 AAQ89208 Q8N5I4
DQ891613 ABM82539  
DQ893640 ABM84566  
DQ894805 ABM85731  
DQ895604 ABM86530  
AB018328 BAA34505 O96006
Y16947 CAA76545 O96006
AL137300 CAB70685 Q8N5I4
AJ293620 CAC82170 Q8N5I4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DHRSX NP_660160 M.musculus Dhrsx 236082 Gene Info NP_001028498 57
R.norvegicus Dhrsx 288525   NP_001099384 55
A.gambiae AgaP_AGAP011810 1280839   XP_552427 41
D.melanogaster CG11200 37301   NP_611471 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)