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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNFRSF8, Tumor necrosis factor receptor superfamily, member 8
Sequence ID:NM_001243
NM_152942
RefSeqGene ID:NG_029573
Entrez Gene ID:943
Ensembl ID:ENSG00000120949

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 12185957 - 12204207

 Exon Info From UCSC:
NM_001243
NM_152942

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020387Full LengthBC136400tumor necrosis factor receptor superfamily, member 8
5219187IncompleteBC073839tumor necrosis factor receptor superfamily, member 8
40147247IncompleteBC141804tumor necrosis factor receptor superfamily, member 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001234  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243 NP_001234   TNFR_c6
NM_152942 NP_694421    

Related Sequences

 
mRNAGenPeptSwissProt
M83554 AAA51947 P28908
S75768 AAD14188 P28908
BC063482 AAH63482 P28908
BC073839 AAH73839 Q6GMU3
BC136400 AAI36401 B9EGD9
BC141804 AAI41805 A5D8T4
D86042 BAA12973 P28908

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNFRSF8 NP_001234 M.musculus Tnfrsf8 21941 Gene Info NP_033427 53
R.norvegicus Tnfrsf8 25069   NP_062008 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)