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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PATE3, Prostate and testis expressed 3
Sequence ID:NM_001129883
Entrez Gene ID:100169851
Ensembl ID:ENSG00000236027

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 125658005 - 125661495

NM_001129883 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
190125658005125658094
91213125659280125659402
2141334125660372125661492

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001129883 NP_001123355 B3GLJ2  

Related Sequences

 
mRNAGenPeptSwissProt
EF426753 ABR09862 B3GLJ2
EU703625 ACD81924 B3GLJ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PATE3 NP_001123355 M.musculus Gm17365 100312956 Gene Info NP_001161064 64
R.norvegicus LOC100361414 100361414   XP_002729972 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)