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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNTFR, ciliary neurotrophic factor receptor
Sequence ID:NM_001207011
NM_001842
NM_147164
Entrez Gene ID:1271
Ensembl ID:ENSG00000122756

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 34551431 - 34559574

 Exon Info From UCSC:
NM_001842
NM_147164

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3510004Full LengthBC001492ciliary neurotrophic factor receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_671693  NP_001833  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001207011 NP_001193940    
NM_001842 NP_001833 P26992 fn3
ig
NM_147164 NP_671693 P26992 fn3
ig

Related Sequences

 
mRNAGenPeptSwissProt
M73238 AAA35707 P26992
BC001492 AAH01492 P26992
BT019824 AAV38627 P26992
DQ895455 ABM86381  
EU176339 ABW03790  
AK127444 BAG54504 B3KXJ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNTFR NP_001193940 M.musculus Cntfr 12804 Gene Info NP_057882 95
R.norvegicus Cntfr 313173   NP_001003929 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)