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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. UBE2D1, ubiquitin-conjugating enzyme E2D 1
Sequence ID:NM_001204880
NM_003338
Entrez Gene ID:7321
Ensembl ID:ENSG00000072401

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 60094815 - 60129356

Transcript StartTranscript EndChromosomal Start Chromosomal End
12476009473860094984
2483116012109760121160
3123436012125460121285
3444216012336860123445
4225276012453060124635
5286216012768260127775
62226516012847960130508

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4106710Full LengthBC005980ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
4305900Full LengthBC015997ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003329  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001204880 NP_001191809      
NM_003338 NP_003329 P51668 EC 6.3.2.19 UQ_con

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC005980 AAH05980 P51668 EC 6.3.2.19
BC015997 AAH15997 P51668 EC 6.3.2.19
AF257220 AAM81086 P51668 EC 6.3.2.19
BT007041 AAP35690 P51668 EC 6.3.2.19
DQ893111 ABM84037    
DQ896385 ABM87384    
AK291901 BAF84590 P51668 EC 6.3.2.19
X78140 CAA55019 P51668 EC 6.3.2.19
AJ272367 CAC82177 P51668 EC 6.3.2.19

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBE2D1 NP_003329 M.musculus Ube2d1 216080 Gene Info NP_663395 100
R.norvegicus Ube2d1 361831   NP_001102000 100
A.thaliana UBC9 828909   NP_567791 78
A.thaliana UBC10 835411   NP_851181 77
A.thaliana UBC28 842728   NP_001031228 76
A.thaliana UBC8 834173   NP_001190447 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta