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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CACNA1S, Calcium channel, voltage-dependent, L type, alpha 1S subunit
Sequence ID:NM_000069
RefSeqGene ID:NG_009816
Entrez Gene ID:779
Ensembl ID:ENSG00000081248

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HYPOKALEMIC PERIODIC PARALYSIS, TYPE 1KCNE3
SCN4A
MALIGNANTHYPERTHERMIA SUSCEPTIBILITY 5 
THYROTOXIC PERIODIC PARALYSIS 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 201008750 - 201081538

 Exon Info From UCSC:
NM_000069

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40073990Full LengthBC133671calcium channel, voltage-dependent, L type, alpha 1S subunit

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000069 NP_000060 Q13698  

Related Sequences

 
mRNAGenPeptSwissProt
U09784 AAA20531 Q13698
L33798 AAA51902 Q13698
U14413 AAC50397 Q12966
U18986 AAC50398 Q13062
BC133671 AAI33672 Q13698

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CACNA1S NP_000060 M.musculus Cacna1s 12292 Gene Info NP_001074492 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)