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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. C17orf80, Chromosome 17 open reading frame 80
Sequence ID:NM_017941
NM_001100621
NM_001100622
Entrez Gene ID:55028
Ensembl ID:ENSG00000141219

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 71228800 - 71241483

 Exon Info From UCSC:
NM_017941
NM_001100621
NM_001100622

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3544728Full LengthBC005005chromosome 17 open reading frame 80

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001100621 NP_001094091    
NM_001100622 NP_001094092    
NM_017941 NP_060411 Q9BSJ5  

Related Sequences

 
mRNAGenPeptSwissProt
BC005005 AAH05005 Q9BSJ5
AY163812 AAO25513 Q9BSJ5
AY239293 AAP72185 Q9BSJ5
AK000728 BAA91344 Q9BSJ5
AK027166 BAB15680 Q9BSJ5
AK292838 BAF85527 Q9BSJ5
AK301905 BAH13581 B7Z7E5
AL136740 CAB66674 Q9BSJ5
AM393125 CAL38003  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C17orf80 NP_001094092 R.norvegicus MGC95210 287798   NP_001005532 52
M.musculus D11Wsu47e 276852 Gene Info NP_808445 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)