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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCKAR, Cholecystokinin A receptor
Sequence ID:NM_000730
RefSeqGene ID:NG_012053
Entrez Gene ID:886
Ensembl ID:ENSG00000163394

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p15.1-p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 26483259 - 26492084

NM_000730 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17752648301726483791
7769032648477726484904
90411652648725826487519
116614172649085426491105
141816822649177726492041

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915519Full LengthBC074987cholecystokinin A receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000721  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000730 NP_000721 P32238 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
L19315 AAA02819 P32238
L13605 AAA35659 P32238
BC074987 AAH74987 P32238
AY322549 AAP84362 P32238
AK313978 BAG36692 P32238

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCKAR NP_000721 R.norvegicus Cckar 24889   NP_036820 92
M.musculus Cckar 12425 Gene Info NP_033957 91
D.melanogaster CCKLR-17D1 32860   NP_001097021 41
D.melanogaster CCKLR-17D3 32864   NP_001097023 40
C.elegans ckr-2 175341   NP_001022844 36
C.elegans ckr-1 188774   NP_491918 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)