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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BRIP1, BRCA1 interacting protein C-terminal helicase 1
Sequence ID:NM_032043
RefSeqGene ID:NG_007409
Entrez Gene ID:83990
Ensembl ID:ENSG00000136492

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BREAST CANCERAKT1
ATM
BARD1
BRCA1
BRCA2
CASP8
CDH1
CHEK2
CHEK2
HMMR
KRAS
NQO2
NQO2
PALB2
PHB
PIK3CA
PIK3CA
PPM1D
RAD51
RAD54L
RB1CC1
SLC22A18
TP53
TP53
TSG101
XRCC3
XRCC3
FANCONI ANEMIA,COMPLEMENTATION GROUP J 

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 59759984 - 59940755

 Exon Info From UCSC:
NM_032043

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8068978Full LengthBC101472BRCA1 interacting protein C-terminal helicase 1
8068980Full LengthBC101474BRCA1 interacting protein C-terminal helicase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114432  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_032043 NP_114432 Q9BX63 EC 3.6.4.13 DEAD_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC101472 AAI01473 Q9BX63 EC 3.6.4.13
BC101474 AAI01475 Q9BX63 EC 3.6.4.13
AF360549 AAK38111 Q9BX63 EC 3.6.4.13
HQ258538 ADR83292    
AK074713 BAC11156 Q9BX63 EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BRIP1 NP_114432 M.musculus Brip1 237911 Gene Info NP_840094 75
R.norvegicus Brip1 360588   XP_340870 75
C.elegans dog-1 173370   NP_493618 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)