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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRMT6, tRNA methyltransferase 6 homolog (S. cerevisiae)
Sequence ID:NM_015939
Entrez Gene ID:51605
Ensembl ID:ENSG00000089195

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 5918509 - 5931123

 Exon Info From UCSC:
NM_015939

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3458167Full LengthBC001262tRNA methyltransferase 6 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057023  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015939 NP_057023 Q9UJA5 Gcd10p

Related Sequences

 
mRNAGenPeptSwissProt
AF132943 AAD27718 Q9UJA5
BC001262 AAH01262 Q9UJA5
AB032979 BAA86467 Q9UJA5
AK300812 BAG62468 B4DUV6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRMT6 NP_057023 M.musculus Trmt6 66926 Gene Info NP_780322 86
R.norvegicus Trmt6 311441   NP_001101249 86
A.gambiae AgaP_AGAP009904 1279318   XP_319025 34
A.thaliana AT2G45730 819181   NP_566054 33
D.melanogaster CG9596 33920   NP_995638 32
C.elegans ZK858.7 259389   NP_492452 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)