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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNTNAP3, contactin associated protein-like 3
Sequence ID:NM_033655
Entrez Gene ID:79937
Ensembl ID:ENSG00000106714

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 39084968 - 39288195

 Exon Info From UCSC:
NM_033655

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146759Full LengthBC132737contactin associated protein-like 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_387504  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033655 NP_387504 Q9BZ76 EGF
F5_F8_type_C
Laminin_G_2

Related Sequences

 
mRNAGenPeptSwissProt
AF333769 AAG52889 Q9BZ76
BC132737 AAI32738 A2RU34
AB051501 BAB21805 Q9BZ76
AK056833 BAB71293 Q96MJ5
AK294281 BAG57566 B4DFV5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNTNAP3 NP_387504 M.musculus Cntnap3 238680 Gene Info NP_001074598 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)