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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. HPGDS, hematopoietic prostaglandin D synthase
Sequence ID:NM_014485
RefSeqGene ID:NG_032150
Entrez Gene ID:27306
Ensembl ID:ENSG00000163106

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 95220373 - 95264027

NM_014485 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110899521970695220794
109011889522329695223394
118912989522978495229893
129913919523902395239115
139215339525564795255788
153416159526394595264026

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4731411Full LengthBC020734prostaglandin D2 synthase, hematopoietic

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055300  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_014485 NP_055300 O60760 EC 2.5.1.18
EC 5.3.99.2
GST_C
GST_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC020734 AAH20734 O60760 EC 2.5.1.18
EC 5.3.99.2
D82073 BAA25545 O60760 EC 2.5.1.18
EC 5.3.99.2
AK290075 BAF82764 O60760 EC 2.5.1.18
EC 5.3.99.2
CR541662 CAG46463 O60760 EC 2.5.1.18
EC 5.3.99.2
CR541679 CAG46480 O60760 EC 2.5.1.18
EC 5.3.99.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HPGDS NP_055300 R.norvegicus Hpgds 58962   NP_113832 81
M.musculus Hpgds 54486 Gene Info NP_062328 80
C.elegans gst-5 187537   NP_496357 41
C.elegans gst-27 175166   NP_497116 41
C.elegans gst-37 189575   NP_503532 41
C.elegans gst-28 190224   NP_497117 40
C.elegans gst-26 190223   NP_497115 40
C.elegans gst-39 190226   NP_497119 40
C.elegans gst-2 177884   NP_501847 40
C.elegans gst-29 190225   NP_497118 39
C.elegans gst-30 191347   NP_494902 39
C.elegans gst-24 185407   NP_496859 39
C.elegans gst-32 190230   NP_497123 39
D.melanogaster GstS1 36927   NP_523767 39
C.elegans gst-4 177886   NP_501848 38
C.elegans gst-20 175008   NP_496858 38
C.elegans gst-31 190228   NP_497121 38
C.elegans gst-13 188915   NP_495967 37
C.elegans gst-14 185409   NP_496861 37
C.elegans gst-15 185410   NP_496860 36
C.elegans gst-9 187615   NP_001022266 36
C.elegans gst-6 173841   NP_494882 36
C.elegans gst-3 177883   NP_501846 36
A.gambiae GST_ANOGA 1272645   XP_311546 35
C.elegans gst-19 175010   NP_496864 35
C.elegans gst-16 175009   NP_496863 35
C.elegans gst-8 184364   NP_494884 35
C.elegans gst-18 185412   NP_496866 35
C.elegans gst-38 185299   NP_506983 35
C.elegans gst-12 185408   NP_496862 35
C.elegans gst-35 259481   NP_741061 35
C.elegans gst-7 173842   NP_494883 34
C.elegans gst-36 187645   NP_509652 33
C.elegans gst-22 180088   NP_507095 33
C.elegans gst-21 191412   NP_503492 32
C.elegans gst-33 178771   NP_503968 32
C.elegans gst-34 260015   NP_741060 32
C.elegans gst-17 185411   NP_496865 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta